Mathematical & Computational Biology

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Domelevo Entfellner, Jean-Baka, Scientist - Bioinformatics, ILRI, ILRI
Guignon, Valentin, Associate Scientist, The Alliance of Bioversity International and CIAT, The Alliance of Bioversity and CIAT
McNally, Kenneth, Senior Scientist II, IRRI, IRRI
PEREZ RODRIGUEZ, Paulino, Consultant, CIMMYT, CIMMYT
ULAT, Victor Jun, Applied Bioinformatics Specialist, CIMMYT, CIMMYT

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A General Bayesian Estimation Method of Linear–Bilinear Models Applied to Plant Breeding Trials With Genotype × Environment Interaction
A Restricted Selection Index Method Based on Eigenanalysis
AlphaMPSim: flexible simulation of multi-parent crosses
Analysis of variety yield trials using two-dimensional separable ARIMA processes
BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology.
Benchmarking database systems for Genomic Selection implementation.
BioMart Central Portal: an open database network for the biological community
BioMoby extensions to the Taverna workflow management and enactment software
BrAPI-an application programming interface for plant breeding applications.
Comparing predictive abilities of longitudinal child growth models
Competition and species coexistence in a metapopulation model: can fast asymmetric migration reverse the outcome of competition in a homogeneous environment?
Constructing linkage maps in the genomics era with MapDisto 2.0.
Cooperativity, absolute interaction, and algebraic optimization.
Core Hunter: an algorithm for sampling genetic resources based on multiple genetic measures
Distributed Lag Models for Hydrological Data
Distribution and asymptotic behavior of the phylogenetic transfer distance.
Do Spatial Designs Outperform Classic Experimental Designs
Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences
Genomic Prediction Models for Count Data
Identifying QTLs and Epistasis in Structured Plant Populations Using Adaptive Mixed LASSO
Inverse sampling regression for pooled data.
Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping
Linking genotype to phenotype: the International Rice Information System (IRIS).
Maximum likelihood estimation of between and within variations in energy and protein intakes from infancy to adolescence for the Philippines.
Modelling the Covariance Structure in Marginal Multivariate Count Models: Hunting in Bioko Island
On the approximation of interaction effect models by Hadamard powers of the additive genomic relationship.
Plant & Animal Genome (PAG) meeting bioinformatics session paper competition
Positive interactions, discontinuous transitions and species coexistence in plant communities.
Power evaluation of small drug and vaccine experiments with binary outcomes.
PowerCore: a program applying the advanced M strategy with a heuristic search for establishing core sets.
Progress in single-access information systems for wheat and rice crop improvement.
Quantifying energy dissipation by grazing animals in harsh environments.
REVERSALS OF CHAOS IN BIOLOGICAL-CONTROL SYSTEMS
Relative Stability, Performance, and Superiority of Crop Genotypes Across Environments
Revealing sequence variation patterns in rice with machine learning methods
Selection of the Bandwidth Parameter in a Bayesian Kernel Regression Model for Genomic-Enabled Prediction
Small vaccination experiments with binary outcome: The paradox of increasing power with decreasing sample size and/or increasing imbalance
Smooth additive mixed models for predicting aboveground biomass
Studying crossover genotype × environment interaction using linear-bilinear models and mixed models
Ten Simple Rules for Organizing a Virtual Conference—Anywhere
Ten simple rules for organizing a webinar series
The eBioKit, a stand-alone educational platform for bioinformatics.
TparvaDB: a database to support Theileria parva vaccine development
Transposable element annotation of the rice genome
Using linear-bilinear models for studying gene expression × treatment interaction in microarray experiments
solGS: a web-based tool for genomic selection

Mathematical & Computational Biology Concept

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