selected publications
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article
- A novel high-accuracy genome assembly method utilizing a high-throughput workflow. bioRxiv. 2020
- Transcriptional responses of toxigenic and atoxigenic isolates of Aspergillus flavus to oxidative stress in aflatoxin-conducive and non-conducive media. World Mycotoxin Journal. 1-16. 2020
- Two New Aspergillus flavus Reference Genomes Reveal a Large Insertion Potentially Contributing to Isolate Stress Tolerance and Aflatoxin Production.. G3-GENES GENOMES GENETICS. 10:3515-3531. 2020
- Nested‐association mapping (NAM)‐based genetic dissection uncovers candidate genes for seed and pod weights in peanut ( Arachis hypogaea ). Plant Biotechnology Journal. 18:1457-1471. 2020
- Arachis hypogaea gene expression atlas for fastigiata subspecies of cultivated groundnut to accelerate functional and translational genomics applications.. Plant Biotechnology Journal. 18:2187-2200. 2020
- Translational genomics for achieving higher genetic gains in groundnut.. Theoretical and Applied Genetics. 133:1679-1702. 2020
- High-density SNP map facilitates fine mapping of QTLs and candidate genes discovery for Aspergillus flavus resistance in peanut (Arachis hypogaea). Theoretical and Applied Genetics. 133:2239-2257. 2020
- Functional Biology and Molecular Mechanisms of Host-Pathogen Interactions for Aflatoxin Contamination in Groundnut (Arachis hypogaea L.) and Maize (Zea mays L.).. Frontiers in Microbiology. 11:227. 2020
- Molecular Basis of Root Nodule Symbiosis between Bradyrhizobium and 'Crack-Entry' Legume Groundnut (Arachis hypogaea L.). 2020
- Publisher Correction: A recombination bin-map identified a major QTL for resistance to Tomato Spotted Wilt Virus in peanut (Arachis hypogaea). Scientific Reports. 10:2244. 2020
- A recombination bin-map identified a major QTL for resistance to Tomato Spotted Wilt Virus in peanut (Arachis hypogaea).. Scientific Reports. 9:18246. 2019
- Carbohydrate, glutathione, and polyamine metabolism are central to Aspergillus flavus oxidative stress responses over time.. BMC Microbiology. 19:1-14. 2019
- Mitigating Aflatoxin Contamination in Groundnut through A Combination of Genetic Resistance and Post-Harvest Management Practices.. Toxins. 11:315. 2019
- The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics. 51:865-876. 2019
- The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature Genetics. 51:877-884. 2019
- Genetic imprints of domestication for disease resistance, oil quality, and yield component traits in groundnut (Arachis hypogaea L.). Molecular Genetics and Genomics. 294:365-378. 2019
- Climate-Smart Groundnuts for Achieving High Productivity and Improved Quality: Current Status, Challenges, and Opportunities 2019
- Carbohydrate, glutathione, and polyamine metabolism are central to Aspergillus flavus oxidative stress responses over time. bioRxiv. 511170. 2019
- High-density genetic map using whole-genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut.. Plant Biotechnology Journal. 16:1954-1967. 2018
- Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability.. Scientific Reports. 8:3430-3430. 2018
- Aspergillus flavus infection triggered immune responses and host-pathogen cross-talks in groundnut during in-vitro seed colonization.. Scientific Reports. 7:9659-9659. 2017
- QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.).. Plant Biotechnology Journal. 15:927-941. 2017
- Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea).. Frontiers in Plant Science. 8:1209-1209. 2017
- Molecular Mapping of Oil Content and Fatty Acids Using Dense Genetic Maps in Groundnut (Arachis hypogaea L.). Frontiers in Plant Science. 8:794-794. 2017
- Development and Evaluation of a High Density Genotyping 'Axiom_Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut.. Scientific Reports. 7:40577. 2017
- Co-localization of major quantitative trait loci for pod size and weight to a 3.7 cM interval on chromosome A05 in cultivated peanut (Arachis hypogaea L.). BMC Genomics. 18:58-58. 2017
- Classical and Molecular Approaches for Mapping of Genes and Quantitative Trait Loci in Peanut 2017
- Drought stress and aflatoxin contamination: transcriptional responses of Aspergillus flavusto oxidative stress are related to stress tolerance and aflatoxin production capability 2017
- Genetic Dissection of Novel QTLs for Resistance to Leaf Spots and Tomato Spotted Wilt Virus in Peanut (Arachis hypogaea L.). Frontiers in Plant Science. 8:25. 2017
- History and Impact of the International Peanut Genome Initiative: The Exciting Journey Toward Peanut Whole-Genome Sequencing 2017
- The first high density genotyping ?Axiom_Arachis? 58K SNPs array for genetic studies and molecular breeding in groundnut 2017
- Oxidative stress and carbon metabolism influence Aspergillus flavus transcriptome composition and secondary metabolite production.. Scientific Reports. 6:38747. 2016
- Mapping Quantitative Trait Loci of Resistance to Tomato Spotted Wilt Virus and Leaf Spots in a Recombinant Inbred Line Population of Peanut (Arachis hypogaea L.) from SunOleic 97R and NC94022. PLOS ONE. 11. 2016
- Analysis of genetic diversity and population structure of peanut cultivars and breeding lines from China, India and the US using simple sequence repeat markers. Journal of Integrative Plant Biology. 58:452-465. 2016
- The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.. Nature Genetics. 48:438-+. 2016
- Annotation of Trait Loci on Integrated Genetic Maps of Arachis Species 2016
- Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression 2016
- Resistance to Aspergillus flavus in maize and peanut: Molecular biology, breeding, environmental stress, and future perspectives. Crop Journal. 3:229-237. 2015
- Genetic Mapping of QTLs Controlling Fatty Acids Provided Insights into the Genetic Control of Fatty Acid Synthesis Pathway in Peanut (Arachis hypogaea L.). PLOS ONE. 10. 2015
- Identification of QTLs associated with oil content and mapping FAD2 genes and their relative contribution to oil quality in peanut (Arachis hypogaea L.). BMC Genetics. 15:133-133. 2014
- Identification of QTLs associated with oil content and mapping FAD2 genes and their relative contribution to oil quality in peanut (Arachis hypogaea L.). BMC Genetics. 15:133-133. 2014
- Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World. PLOS ONE. 9. 2014
- Genetic Mapping and Quantitative Trait Loci Analysis for Disease Resistance Using F 2 and F 5 Generation-based Genetic Maps Derived from 'Tifrunner' × 'GT-C20' in Peanut. The Plant Genome. 6:1-10. 2013
- Recent Advances in Molecular Genetic Linkage Maps of Cultivated Peanut. Peanut Science. 40:95-106. 2013
- Identification of Expressed Resistance Gene Analogs from Peanut (Arachis hypogaea L.) Expressed Sequence Tags. Journal of Integrative Plant Biology. 55:453-461. 2013
- Integrated Consensus Map of Cultivated Peanut and Wild Relatives Reveals Structures of the A and B Genomes of Arachis and Divergence of the Legume Genomes. DNA Research. 20:173-184. 2013
- The Peanut Genome Consortium and Peanut Genome Sequence: Creating a better future through global food security 2013
- An International Reference Consensus Genetic Map with 897 Marker Loci Based on 11 Mapping Populations for Tetraploid Groundnut (Arachis hypogaea L.). PLOS ONE. 7. 2012
- Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.) 2012
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dataset
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document
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review
- Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement. Functional & Integrative Genomics. 739-761. 2020
- Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics. Biotechnology Advances. 1120-1134. 2013
- Advances in Arachis genomics for peanut improvement. Biotechnology Advances. 639-651. 2012