Publications in VIVO

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MacKill, David Person

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article
- Mapping additional QTLs from FR13A to increase submergence tolerance in rice beyond SUB1. Euphytica. 209:627-636. 2016
- From QTL to variety-harnessing the benefits of QTLs for drought, flood and salt tolerance in mega rice varieties of India through a multi-institutional network.. Plant Science. 242:278-287. 2016
- A trehalose-6-phosphate phosphatase enhances anaerobic germination tolerance in rice.. Nature plants. 1:15124-15124. 2015
- Accelerating the development of new submergence tolerant rice varieties: the case of Ciherang-Sub1 and PSB Rc18-Sub1. Euphytica. 202:259-268. 2015
- New Submergence tolerant rice for flood-affected areas in Asia and Africa 2014
- Physiological basis of tolerance to complete submergence in rice involves genetic factors in addition to the SUB1 gene. Aob Plants. 6. 2014
- Variation in tolerance of rice to long-term stagnant flooding that submerges most of the shoot will aid in breeding tolerant cultivars. Aob Plants. 6. 2014
- The contribution of submergence-tolerant (Sub1) rice varieties to food security in flood-prone rainfed lowland areas in Asia. Field Crops Research. 152:83-93. 2013
- RESPONSE OF SUB1 INTROGRESSION LINES OF RICE TO VARIOUS FLOODING CONDITIONS. Indonesian Journal of Agricultural Science. 14:15-26. 2013
- QTL Mapping and Confirmation for Tolerance of Anaerobic Conditions During Germination Derived From the Rice Landrace Ma-Zhan Red. Theoretical and Applied Genetics. 126:1357-1366. 2013
- Field performance, dissemination, impact and tracking of submergence tolerant (Sub1) rice varieties in South Asia 2013
- Overview of and historical perspectives on the EIRLSBN 2013
- Comparison of phenotypic versus marker-assisted background selection for the SUB1 QTL during backcrossing in rice. Breeding Science. 62:216-222. 2012
- Identifying novel QTLs for submergence tolerance in rice cultivars IR72 and Madabaru.. Theoretical and Applied Genetics. 124:867-874. 2012
- Tolerance of longer-term partial stagnant flooding is independent of the SUB1 locus in rice. Field Crops Research. 121:311-323. 2011
- Submergence risks and farmers’ preferences: Implications for breeding Sub1 rice in Southeast Asia. Agricultural Systems. 104:335-347. 2011
- Rapid and high-precision marker assisted backcrossing to introgress the SUB1 QTL into BR11, the rainfed lowland rice mega variety of Bangladesh. Euphytica. 178:83-97. 2011
- Identification of SUB1A alleles from wild rice Oryza rufipogon Griff.. Genetic Resources and Crop Evolution. 58:1237-1242. 2011
- Breeding temperate japonica rice for cold tolerance and superior grain quality 2011
- Broadening gene pool of rice: wild species introgression and marker assisted selection 2011
- Development of submergence tolerant Japonica rice variety 2011
- Stress tolerant rice: 35 years of progress 1975-2010 2011
- Submergence Tolerant Rice: SUB1's Journey from Landrace to Modern Cultivar. Rice. 3:138-147. 2010
- Molecular marker survey and expression analyses of the rice submergence-tolerance gene SUB1A. Theoretical and Applied Genetics. 121:1441-1453. 2010
- Identification and analysis of QTLs controlling cold tolerance at the reproductive stage and validation of effective QTLs in cold-tolerant genotypes of rice (Oryza sativa L.). Theoretical and Applied Genetics. 120:985-995. 2010
- QTLs associated with tolerance of flooding during germination in rice (Oryza sativa L.). Euphytica. 172:159-168. 2010
- Bridging sd1 molecular knowledge with recent breeding strategies for the improvement of traditional rice varieties - a japonica case-study. African Journal of Biotechnology. 9:2192-2200. 2010
- Intended process and methods for a strategic assessment of international rice research priorities 2010
- Marker Assisted Breeding 2010
- Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America. 106:12273-12278. 2009
- Responses of SUB1 rice introgression lines to submergence in the field: yield and grain quality. Field Crops Research. 113:12-23. 2009
- Conserved DNA-Derived Polymorphism (CDDP): A Simple and Novel Method for Generating DNA Markers in Plants. Plant Molecular Biology Reporter. 27:558-562. 2009
- Start Codon Targeted (SCoT) Polymorphism: A Simple, Novel DNA Marker Technique for Generating Gene-Targeted Markers in Plants. Plant Molecular Biology Reporter. 27:86-93. 2009
- Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond.. Annals of Botany. 103:151-160. 2009
- Mechanisms associated with tolerance to flooding during germination and early seedling growth in rice (Oryza sativa).. Annals of Botany. 103:197-209. 2009
- Performance of submergence tolerant rice (Oryza sativa) genotypes carrying the Sub1 quantitative trait locus under stressed and non-stressed natural field conditions 2009
- Rice Molecular Breeding Laboratories in the Genomics Era: Current Status and Future Considerations. International Journal of Plant Genomics. 2008:524847-524847. 2008
- Breeding for Resistance to Abiotic Stresses in Rice: The Value of Quantitative Trait Loci 2008
- Comparison of the observed with the simulated distributions of the parental genome contribution in two marker-assisted backcross programs in rice. Theoretical and Applied Genetics. 116:739-744. 2008
- Breeding for submergence tolerance 2008
- Broadening gene pool of rice: Wild species introgression and marker assisted selection 2008
- Epistatic and quantitative resistance loci against philippine bacterial blight races 6 and 9 for resistance breeding and crop management. Phytopathology. 98:S132-S132. 2008
- Rice molecular breeding laboratories in the genomics era: current status and future considerations? 2008
- A marker-assisted backcross approach for developing submergence-tolerant rice cultivars.. Theoretical and Applied Genetics. 115:767-776. 2007
- Evaluation of ‘quick and dirty’ DNA extraction methods for marker‐assisted selection in rice (Oryza sativa L.). Plant Breeding. 126:47-50. 2007
- Improving drought tolerance of rice by designed QTL pyramiding 2007
- Marker assisted selection for submergence tolerance in rice 2007
- Molecular markers and marker-assisted selection in rice 2007
- The Oryza Map Alignment Project (OMAP): A New Resource for Comparative Genome Studies within Oryza 2007
- Relating rice traits to weed competitiveness and yield: a path analysis. Weed Science. 54:1122-1131. 2006
- Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice. Nature. 442:705-708. 2006
- Marker-free transgenic (MFT) near-isogenic introgression lines (NIILs) of 'golden' indica rice (cv. IR64) with accumulation of provitamin A in the endosperm tissue.. Plant Biotechnology Journal. 4:467-475. 2006
- Hidden diversity for abiotic and biotic stress tolerances in the primary gene pool of rice revealed by a large backcross breeding program. Field Crops Research. 97:66-76. 2006
- Improvement of rice drought tolerance through backcross breeding: Evaluation of donors and selection in drought nurseries. Field Crops Research. 97:77-86. 2006
- Sequencing Multiple and Diverse Rice Varieties. Connecting Whole-Genome Variation with Phenotypes. Plant Physiology. 141:26-31. 2006
- Submergence: Development of waterproof rice 2006
- The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza. Genome Research. 16:140-147. 2006
- The Oryza Map Alignment Project : the golden path to unlocking the genetic potential of wild rice species. Plant Molecular Biology. 59:53-62. 2005
- A Microsatellite Marker and a Codominant PCR‐Based Marker for Marker‐Assisted Selection of Submergence Tolerance in Rice. Crop Science. 44:248-253. 2004
- A Microsatellite marker and a codominant PCR-based marker for marker-assisted selection of submergence tolerance in rice. Crop Science. 44:248-253. 2004
- A Model Crop Species: Molecular Markers in Rice 2004
- QTLs conferring cold tolerance at the booting stage of rice using recombinant inbred lines from a japonica × indica cross. Theoretical and Applied Genetics. 106:1084-1090. 2003
- Mapping of QTLs associated with cold tolerance during the vegetative stage in rice. Journal of Experimental Botany. 54:2579-2585. 2003
- Marker assisted selection- a new paradigm in plant breeding 2003
- Evaluation of Genetic Diversity in Rice Subspecies Using Microsatellite Markers. Crop Science. 42:601-607. 2002
- RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines. Philippine Agricultural Scientist. 85:68-76. 2002
- Use of DNA Markers in introgression and isolation of genes associated with durable resistance to rice blast 2001
- Molecular mapping of the blast resistance gene, Pi44(t), in a line derived from a durably resistant rice cultivar.. Theoretical and Applied Genetics. 98:1046-1053. 1999
- Identification of RAPD markers linked to a major blast resistance gene in rice. Molecular Breeding. 1:341-348. 1995
- Locating genes associated with root morphology and drought avoidance in rice via linkage to molecular markers.. Theoretical and Applied Genetics. 90:969-981. 1995
- RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar. Genetics. 136:1421-1434. 1994
- ALLELISM OF BLAST RESISTANCE GENES IN NEAR-ISOGENIC LINES OF RICE. Phytopathology. 84:1278-1283. 1994
- Improved Semidwarf Rice Lines with Tolerance to Submergence of Seedlings. Crop Science. 33:749-753. 1993
- RFLP Mapping of Genes Conferring Complete and Partial Resistance in a Rice Cultivar with Durable Resistance to Blast 1993
- INHERITANCE OF BLAST RESISTANCE IN NEAR-ISOGENIC LINES OF RICE. Phytopathology. 82:746-749. 1992
- Tagging genes for blast resistance in rice via linkage to RFLP markers.. Theoretical and Applied Genetics. 81:471-476. 1991
- Inheritance of Partial Resistance to Blast in Indica Rice Cultivars 1989
- PHOTOPERIOD SENSITIVITY IN THREE RICE CROSSES. Euphytica. 35:751-760. 1986
- Global evaluation of rice varietal reactions to blast disease 1986
- Varietal improvement for rainfed lowland rice in South and Southeast Asia: results of a survey 1986
- Induced-mutant semidwarfing genes in rice 1979
dataset
- Development and Rapid Adoption of Submergence-Tolerant (Sub1) Rice Varieties. Advances in Agronomy. 299-352. 2012
document
editorial article
- Rice Genetics: Progress and Applications. Rice. 3:87-88. 2010
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- Molecular Markers and Their Use in Marker-Assisted Selection in Rice. Crop Science. 1266-1276. 2008
- Integration of genomic tools to assist breeding in the japonica subspecies of rice. Molecular Breeding. 159-168. 2008
- Marker-assisted selection: an approach for precision plant breeding in the twenty-first century. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. 557-572. 2008
review
- The molecularization of public sector crop breeding: progress, problems, and prospects. Advances in Agronomy. 163-318. 2007