The Coffee Genome Hub: a resource for coffee genomes uri icon

abstract

  • The Coffee Genome Hub is an integrated web-based database providing centralized access to coffee community genomics, genetics and breeding data and analysis tools to facilitate basic, translational and applied research in coffee. Data available are the complete genome sequence of C. canephora along with gene structure, gene product information, metabolism, gene families, transcriptomics (ESTs, RNA-Seq), genetic markers and genetic maps. The hub provides also tools for easy querying, visualizing and downloading research data. It is being built using the open-source Tripal database infrastructure. It is developed by IRD and Cirad and supported by the South Green Bioinformatics platform

publication date

  • 2015