Publications in VIVO

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Ishitani, Manabu Senior Scientist, The Alliance of Bioversity International and CIAT

The Alliance of Bioversity and CIAT

Colombia

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selected publications

article
- Field transcriptome analysis reveals a molecular mechanism for cassava-flowering in a mountainous environment in Southeast Asia. Plant Molecular Biology. 1-16. 2020
- The Rice DNA-Binding Protein ZBED Controls Stress Regulators and Maintains Disease Resistance After a Mild Drought.. Frontiers in Plant Science. 11:1265. 2020
- Expression of the CCCH-tandem zinc finger protein gene OsTZF5 under a stress-inducible promoter mitigates the effect of drought stress on rice grain yield under field conditions.. Plant Biotechnology Journal. 18:1711-1721. 2020
- An efficient method of propagating cassava plants using aeroponic culture. Journal of Crop Improvement. 34:64-83. 2020
- An optimized isolation protocol yields high-quality RNA from cassava tissues (Manihot esculenta Crantz).. FEBS Open Bio. 9:814-825. 2019
- Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola.. BMC Genomics. 20:41. 2019
- Sustainable Management of Invasive Cassava Pests in Vietnam, Cambodia, and Thailand 2018
- Correction to: Sustainable Management of Invasive Cassava Pests in Vietnam, Cambodia, and Thailand 2018
- Overexpression of an Arabidopsis thaliana galactinol synthase gene improves drought tolerance in transgenic rice and increased grain yield in the field.. Plant Biotechnology Journal. 15:1465-1477. 2017
- Genetic Diversity and Population Structure of Brachiaria Species and Breeding Populations. CROP SCIENCE. 57:2633-2644. 2017
- Genetic mitigation strategies to tackle agricultural GHG emissions: The case for biological nitrification inhibition technology. Plant Science. 262:165-168. 2017
- Expression of the Aeluropus littoralis AlSAP Gene Enhances Rice Yield under Field Drought at the Reproductive Stage.. Frontiers in Plant Science. 8:994-994. 2017
- Development and field performance of nitrogen use efficient rice lines for Africa. Plant Biotechnology Journal. 15:775-787. 2017
- Estimating rice yield related traits and quantitative trait loci analysis under different nitrogen treatments using a simple tower-based field phenotyping system with modified single-lens reflex cameras. Isprs Journal of Photogrammetry and Remote Sensing. 125:50-62. 2017
- イネの形質と UAV リモートセンシングデータから計算されたカラー指標との比較. ECO-ENGINEERING. 29:11-16. 2017
- Novel Technological and Management Options for Accelerating Transformational Changes in Rice and Livestock Systems. Sustainability. 9. 2017
- Cassava (Manihot esculenta) transcriptome analysis in response to infection by the fungus Colletotrichum gloeosporioides using an oligonucleotide-DNA microarray. Journal of Plant Research. 129:711-726. 2016
- Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon. Acta Physiologiae Plantarum. 38:103. 2016
- OsMADS26 negatively regulates resistance to pathogens and drought tolerance in rice. Plant Physiology. 169:2935-2949. 2015
- Development of disease‐resistant rice by optimized expression of WRKY45. Plant Biotechnology Journal. 13:753-765. 2015
- Guidance for large-scale implementation of alternate wetting and drying : a biophysical suitability assessment : abstract 2014
- Rice Breeding in Latin America. Plant Breeding Reviews. 187-278. 2014
- Root system architecture variation in response to different NH4+ concentrations and its association with nitrogen-deficient tolerance traits in rice. Acta Physiologiae Plantarum. 36:2361-2372. 2014
- N- and P-mediated seminal root elongation response in rice seedlings. Plant and Soil. 375:303-315. 2014
- Biological nitrification inhibition (BNI) in Brachiaria pastures: a novel strategy to improve eco-efficiency of crop-livestock systems and to mitigate climate change 2014
- Developing methods to evaluate phenotypic variability in biological nitrification inhibition (BNI) capacity of Brachiaria grasses 2014
- Nitrogen management in grasslands and forage-based production systems – Role of biological nitrification inhibition (BNI). Tropical Grasslands. 1:168-174. 2013
- Genome-wide discovery and information resource development of DNA polymorphisms in cassava.. PLOS ONE. 8. 2013
- Genome-wide discovery and information resource development of DNA polymorphisms in cassava.. PLOS ONE. 8. 2013
- Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions. Nature Genetics. 45:1097-+. 2013
- Biological nitrification inhibition (BNI) in Brachiaria pastures: A novel strategy to improve eco-efficiency of crop-livestock systems and to mitigate climate change 2013
- Nitrogen management in grasslands and forage-based production systems?Role of biological nitrification inhibition (BNI) 2013
- Transcriptome Analysis Using a High-Density Oligomicroarray under Drought Stress in Various Genotypes of Cassava: An Important Tropical Crop. DNA Research. 19:335-345. 2012
- Transcriptome Analysis Using a High-Density Oligomicroarray under Drought Stress in Various Genotypes of Cassava: An Important Tropical Crop. DNA Research. 19:335-345. 2012
- Cassava Genetic Improvement: Omics Approaches for Facing Global Challenges 2012
- RIKEN Cassava Initiative: Establishment of a Cassava Functional Genomics Platform. Tropical Plant Biology. 5:110-116. 2012
- RIKEN Cassava Initiative: Establishment of a Cassava Functional Genomics Platform. Tropical Plant Biology. 5:110-116. 2012
- Overview of CIAT vision on WUE & NUE 2012
- Construction and EST sequencing of full-length, drought stress cDNA libraries for common beans (Phaseolus vulgaris L.). BMC Plant Biology. 11:171-171. 2011
- BNI (Biological Nitrification Inhibition) funtion in tropical Brachiaria pastures 2011
- Molecular breeding approach in managing abiotic stresses 2011
- Physiological and Biochemical Mechanisms of Plant Adaptation to Low-Fertility Acid Soils of the Tropics: The Case of Brachiariagrasses 2011
- Establishment of drought screening protocols for rice under field conditions. Acta Agronómica. 59:338-346. 2010
- Protocolo para la selección de genotipos de arroz tolerantes a déficit hídrico en campo. Acta Agronómica. 59:338-346. 2010
- Common bean : A model food legume for international agriculture 2009
- Computational analysis of the cassava transcriptome, gene discovery and regulatory element prediction 2008
- Retention of carotenoids in cassava roots submitted to different processing methods. Journal of the Science of Food and Agriculture. 87:388-393. 2007
- DREB genes and deeper rooting phenotype in common bean (Phaseolus vulgaris) for drought tolerance 2007
- Phenotypic evaluation of DREB transgenic rice under water limited conditions 2007
- Reduction or delay of post-harvest physiological deterioration in cassava roots with higher carotenoid content. Journal of the Science of Food and Agriculture. 86:634-639. 2006
- Stress Signal Transduction: components, pathways and network integration 2006
- Integration of genomics approach with traditional breeding towards improving abiotic stress adaptation: drought and aluminum toxicity as case studies. Field Crops Research. 90:35-45. 2004
document
editorial article
- A paradigm shift towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI). Annals of Botany. 112:297-316. 2013
review
- Cassava breeding and agronomy in Asia: 50 years of history and future directions. Breeding Science. 145-166. 2020
- Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response.. BMC Plant Biology. 66-66. 2007