selected publications
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article
- Enriched-GWAS and Transcriptome Analysis to Refine and Characterize a Major QTL for Anaerobic Germination Tolerance in Rice. International Journal of Molecular Sciences. 22. 2021
- Genetic factors enhancing seed longevity in tropical japonica rice. Current Plant Biology. 26. 2021
- A platinum standard pan-genome resource that represents the population structure of Asian rice. Scientific Data. 7:113. 2020
- Multiple streams of genetic diversity in Japonica rice. bioRxiv. 2020
- Advanced Strategic Research to Promote the Use of Rice Genetic Resources. AGRONOMY-BASEL. 10. 2020
- Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian rice. bioRxiv. 2019
- Predicting agronomic traits and associated genomic regions in diverse rice landraces using marker stability. bioRxiv. 805002. 2019
- A high proportion of beta-tocopherol in vitamin E is associated with poor seed longevity in rice produced under temperate conditions: Beta-tocopherol and rice seed longevity. PLANT GENETIC RESOURCES-CHARACTERIZATION AND UTILIZATION. 17:375-378. 2019
- Fine Scale Genomic Signals of Admixture and Alien Introgression Among Asian Rice Landraces. Genome Biology and Evolution. 11:1358-1373. 2019
- Structural variants in 3000 rice genomes.. Genome Research. 29:870-880. 2019
- An imputation platform to enhance integration of rice genetic resources.. Nature Communications. 9:3519. 2018
- Genomic variation in 3,010 diverse accessions of Asian cultivated rice. Nature. 557:43-+. 2018
- High temperature effects on Pi54 conferred resistance to Magnaporthe oryzae in two genetic backgrounds of Oryza sativa.. Journal of Plant Physiology. 212:80-93. 2017
- Rice SNP-seek database update: new SNPs, indels, and queries.. Nucleic Acids Research. 45:D1075-D1081. 2017
- SNP-Seek II: A resource for allele mining and analysis of big genomic data in Oryza sativa ☆. Current Plant Biology. 7:16-25. 2016
- Nucleotide diversity analysis highlights functionally important genomic regions.. Scientific Reports. 6:35730-35730. 2016
- Differential Evolution approach to detect recent admixture. BMC Genomics. 16:1-11. 2015
- Differential Evolution Approach to Detect Recent Admixture. bioRxiv. 2015
- SNP-Seek database of SNPs derived from 3000 rice genomes. Nucleic Acids Research. 43:1023-1027. 2015
- Geographic population structure analysis of worldwide human populations infers their biogeographical origins. Nature Communications. 5:3513-3513. 2014